CDS
| Accession Number | TCMCG015C29154 |
| gbkey | CDS |
| Protein Id | XP_027061122.1 |
| Location | join(15631488..15632234,15632978..15633046,15633160..15634353,15634469..15634567,15634650..15634808,15635536..15635621,15635691..15635889,15637330..15637440,15637919..15638125,15638373..15638465) |
| Gene | LOC113687798 |
| GeneID | 113687798 |
| Organism | Coffea arabica |
Protein
| Length | 987aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA506972 |
| db_source | XM_027205321.1 |
| Definition | 110 kDa U5 small nuclear ribonucleoprotein component CLO-like [Coffea arabica] |
EGGNOG-MAPPER Annotation
| COG_category | J |
| Description | U5 small nuclear ribonucleoprotein |
| KEGG_TC | - |
| KEGG_Module |
M00354
[VIEW IN KEGG] M00355 [VIEW IN KEGG] |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko03041 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12852
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03040
[VIEW IN KEGG] map03040 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGATGACAGTTTGTATGATGAATTTGGGAATTATATTGGGCCTGAAATTGAATCTGATCGAGAGAGCGAAGAAGAGGAGGAAGATGATGAGCTTCCTGGTAGGACAGAGGATGAGGAGGCTGGATCGGATGCTGAGCGTGAACCTGGAGGTTCAAATGGGTGGCTGACTACTACTGATCATGACATTGATATGGAAAACCAGGTGGTTCTTGCAGAGGACAAAAAGTACTACCCAACTGCGGAGGAGGTTTATGGTGAAGAAGTTGAGACATTGGTTATGGACGAGGATGAGTTGCCTCTGGAGCAACCAATAATCAAACCTGTCAAGAACCTCAAGTTTGAATTAGGTGTAAAGGATTCATCCACCTATGTGTCAACGCAGTTTCTTTTAGGTTTAATGTCGAACCCAGCTTTGGTTCGAAATGTAGCTTTGGTGGGACACCTACATCACGGTAAAACCTTGTTTATGGACATGCTGGTGGAGCAAACACACCATATCTCTACTTTTGATGAGAAAAGTGAGAAGCACATGAGATATACAGATACCAGGATCGATGAACAAGAGAGGAAAATATCAATCAAGGCGGTACCCATGTCATTGGTGCTTGAAGATAGCAATTCAAAGTCGTACCTCTGTAACATAATGGATACCCCTGGCCATGTTAATTTCTCTGATGAAATGACTGCAGCTCTAAGGCTCGCTGATGGTGCTGTGCTGATTGTAGATGCTGCTGATGGAGTTATGGTTAATACTGAGAGGGCTATTCGCCATGCAATTCAAGAGCGCCTCCCCATAGTAGTTGTGATAAACAAGGTTGACAGGTTGATAACTGAACTCAAGTTGCCTCCAAAAGATGCATATCATAAGCTAAGGCATTTAATTGAAGCTATCAATACCCACATAACTGCTGCTTCGTCAACTGCTGGAGATGTCCAGGTTATTGACCCCGCTCTTGGGAATGTTTGTTTTGCAAGTGCGAGCGCAGGATGGTCCTTTACACTACAATCGTTTGCTAAGCTATATGTCAAGCTCCATGGCATTCCATTTGATGCCAATAAGTTTGCTTCTCGTCTTTGGGGGGACTATTATTTTGATCCTGATACTAGAGGTTTTAAGAAGAAACAACCTACCAGTGGGGCAGAAAGATCATTTGTCCAATTTGTGCTTGAACCTCTTTACAAAATATATAGCCAGGTAATTGGAGAACATAAGAAGAGTGTGGAGGCTACACTTGCTGAGCTTGGTGTGACTCTTAGCAATGCAGCCTACAGATTAAATGTACGGCCTCTGCTGAGGTTGGCTTGTAGCTCAGTTTTTGGTACTGCTACAGGCTTCACAGACATGTTGGTCCATCGCATTCCTTCTGCCAAAGCTGGTGCAGCTAAGAAGGTTGAGCATATCTATACTGGGCCTACGGACTCGATGATTTTTCAGGCCATGGAAGATTGTGATCCCCATGGTCCTTTAATGGTTAATGTGACAAAACTGTATCCTAAATCTGACTGCAGTGTTTTTGATGCTTTTGGTCGAGTCTATAGTGGTAGAATTATGACTGGGCAGACTGTTCGCGTGCTGGGAGAAGGTTATTCCCCAGAAGATGAGGAGGACATGACAGTGAAAGAAGTAACAAAACTTTGGGTTTATCAAGCTCGTTACAGGATACCGATAAGTGAGGCCCCTCCTGGTTCTTGGGTGCTGATTGAAGGTGTGGATGCTTCAATTATGAAGACTGCTACGCTTTGTAATCAGGACTATGATGAGGATGTATATATATTCCGAGCCCTTCAGTTTAACACTCTTCCAGTTGTGAAAACGGCAACTGAGCCTTTAAATCCGAGTGAGCTACCCAAGATGGTTGAGGGTCTGCGGAAGATAAGAAAAAGTTATCCTCTCGCTATCACGAAGGTAGAAGAATCAGGAGAACACACAATTTTGGGTACTGGGGAATTATACCTAGATTCGATCATGAAGGATCTTCGGGAGCTTTACTCGGAAGTGGAGGTGAAGGTCGCAGATCCGGTTGTCTCCTTCTGCGAAACAGTGGTGGAGTCATCCTCAATGAAATGTTTTGCTGAAACACCTAACAAGAAAAATAAGATTACCATGATTGCTGAGCCTCTGGAAAGAGGACTTGCAGAAGATATTGAGAATGGTGTTGTTAGCATTGACTGGCCTAGGAAGAAACTTGGGGACTTCTTTCAGACGAAGTATGACTGGGACTTGCTTGCTGCAAGGTCCATTTGGGCATTTGGACCTGATAAACAGGGACCTAATATCTTATTAGATGACACACTGTCTAGTGAAGTGGACAAGAGCTTGCTGAATGCCGTGAAAGATTCCATTGTACAAGGGTTTCAATGGGGTGCTCGAGAAGGACCTCTTTGTGATGAGCCCATCAGAAATGTTAAATTCAAGATAGTCGATGCAAAAGTTGCTCCTGAGCCATTGAATCGTGGAACTGGTCAGATAATTCCTACTGCTCGTCGTGTGGCCTACTCAGCTTTCCTTATGGCATCTCCAAGGCTCATGGAACCAGTTTATTATGTGGAGATACAGACCCCTATAGATTGTGTGTCTGCTATATACACGGTGTTGTCCCGCAGGCGTGGCCACGTTACAGCAGATGTTCCTCAACCGGGGACCCCAGCATATATTGTGAAGGCATTTTTACCTGTGATTGAATCATTTGGCTTTGAGACAGACTTGAGGTATCACACTCAAGGGCAAGCATTTTGTCTCTCTGTGTTTGACCATTGGGCTATCGTTCCTGGGGATCCTCTGGACAAGACCATAGTTCTACGACCACTTGAACCTGCACCTATTCAACATTTGGCTCGTGAGTTCATGGTGAAGACACGGCGTAGAAAGGGCATGAGTGAAGATGTGAGCATCAACAAATTTTTTGATGAGGCTATGGTGTTGGAGCTTGCTCAACAGGATGCTGATCAAATGATCCCTTGA |
| Protein: MDDSLYDEFGNYIGPEIESDRESEEEEEDDELPGRTEDEEAGSDAEREPGGSNGWLTTTDHDIDMENQVVLAEDKKYYPTAEEVYGEEVETLVMDEDELPLEQPIIKPVKNLKFELGVKDSSTYVSTQFLLGLMSNPALVRNVALVGHLHHGKTLFMDMLVEQTHHISTFDEKSEKHMRYTDTRIDEQERKISIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMTAALRLADGAVLIVDAADGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPKDAYHKLRHLIEAINTHITAASSTAGDVQVIDPALGNVCFASASAGWSFTLQSFAKLYVKLHGIPFDANKFASRLWGDYYFDPDTRGFKKKQPTSGAERSFVQFVLEPLYKIYSQVIGEHKKSVEATLAELGVTLSNAAYRLNVRPLLRLACSSVFGTATGFTDMLVHRIPSAKAGAAKKVEHIYTGPTDSMIFQAMEDCDPHGPLMVNVTKLYPKSDCSVFDAFGRVYSGRIMTGQTVRVLGEGYSPEDEEDMTVKEVTKLWVYQARYRIPISEAPPGSWVLIEGVDASIMKTATLCNQDYDEDVYIFRALQFNTLPVVKTATEPLNPSELPKMVEGLRKIRKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVVSIDWPRKKLGDFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKSLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDAKVAPEPLNRGTGQIIPTARRVAYSAFLMASPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKTIVLRPLEPAPIQHLAREFMVKTRRRKGMSEDVSINKFFDEAMVLELAQQDADQMIP |